BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB008F04SP1|AL425895
(785 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1746 1465 0.0
>3x_Contig1746
Length = 26672
Score = 1465 bits (733), Expect = 0.0
Identities = 768/785 (97%), Gaps = 1/785 (0%)
Strand = Plus / Minus
Query: 1 gatctaaataagtctacataaggraggtgagtgcttctggtctacatagttccaaaaaca 60
||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 6684 gatctaaataagtctccataaggaaggtgagtgcttctggtctacatagttccaaaaaca 6625
Query: 61 cattccgttatcggccaaatcaaccccagcgcctgccgtttcaattcaattcaataaaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6624 cattccgttatcggccaaatcaaccccagcgcctgccgtttcaattcaattcaataaaac 6565
Query: 121 agaaggtgaacggtaacacatctactttcctatttagaacacaaaccctacctgactcac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6564 agaaggtgaacggtaacacatctactttcctatttagaacacaaaccctacctgactcac 6505
Query: 181 ttactcacttaccacttccagatagatgtctatgtacagtagaaaacaaggccacaaggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6504 ttactcacttaccacttccagatagatgtctatgtacagtagaaaacaaggccacaaggt 6445
Query: 241 tgcatttattggraadrttcagagtttacttgagaatgcggaattgagtatccatcaacc 300
|||||||||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6444 tgcatttattggaaaaattcagagtttacttgagaatgcggaattgagtatccatcaacc 6385
Query: 301 cgcgcacacctgacttgttctttagcaaccatatctractgttttccctcctaacttgca 360
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 6384 cgcgcacacctgacttgttctttagcaaccatatctaactgttttccctcctaacttgca 6325
Query: 361 ttagctttgarctcttccaacaagaragarcaacatacagtcagattatdtcgacgatat 420
|||||||||| |||||||||||||| ||| ||||||||||||||||||| ||||||||||
Sbjct: 6324 ttagctttgaactcttccaacaagaaagaacaacatacagtcagattatatcgacgatat 6265
Query: 421 agtcaatggcaattgcgcctaacggcgaaatcatgtgtacgatatgtctttdtctctttc 480
|||||||||||| | | ||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 6264 agtcaatggcaaatttg-ctaacggcgaaatcatgtgtacgatatgtctttatctctttc 6206
Query: 481 tgttctcatttcttttccagtgataattgcgttagtttccggtttgagatcagttagagg 540
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 6205 tgttctcatttcttttccagtgataattgcgttagtttccggtttgaaatcagttagagg 6146
Query: 541 tctcgagaagcggttttgccctatgtttaccctttgtctttctttatctttcagactctc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6145 tctcgagaagcggttttgccctatgtttaccctttgtctttctttatctttcagactctc 6086
Query: 601 ttatctatcagttgctactcgagagatatttcagatgaggcttcgtcttcgttattcgtt 660
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 6085 ttatctatcagttgctactcgagaaatatttcagatgaggcttcgtcttcgttattcgtt 6026
Query: 661 gttattcgttgctatttgataatcgatagccacagacgtagtagaggtttttagtaagag 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6025 gttattcgttgctatttgataatcgatagccacagacgtagtagaggtttttagtaagag 5966
Query: 721 tgttagtttttgtttgtcggtctggtccagtattagtagtagttttatttgatctcagat 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5965 tgttagtttttgtttgtcggtctggtccagtattagtagtagttttatttgatctcagat 5906
Query: 781 gttag 785
|||||
Sbjct: 5905 gttag 5901
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.712 1.32
Gapped
Lambda K H
1.39 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4815
Number of Sequences: 1807
Number of extensions: 4815
Number of successful extensions: 113
Number of sequences better than 1.0e-20: 1
length of query: 785
length of database: 10,358,551
effective HSP length: 16
effective length of query: 769
effective length of database: 10,329,639
effective search space: 7943492391
effective search space used: 7943492391
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (30.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.4 bits)